Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs12079249 | chr1:212710947 | A/G | 3.22E-7 | 214 | 10.63 | 16.53 | 16.43 | KM Plot |
KIRP | rs12080002 | chr1:89534335 | T/C | 2.66E-5 | 212 | 16.97 | 18 | 9.77 | KM Plot |
KIRP | rs12089335 | chr1:89530425 | C/T | 2.61E-5 | 206 | 16.97 | 18.47 | 10.23 | KM Plot |
KIRP | rs12098184 | chr1:212697303 | G/A | 3.04E-7 | 214 | 16.45 | 14.92 | 10.63 | KM Plot |
KIRP | rs12105811 | chr2:202016245 | C/T | 0.000612 | 214 | 14.03 | 19.4 | 10.83 | KM Plot |
KIRP | rs12116441 | chr1:45896920 | C/T | 5.71E-13 | 212 | 15.88 | 16.53 | 9 | KM Plot |
KIRP | rs12118046 | chr1:89499573 | A/G | 0.00012 | 209 | 16.43 | 16.47 | 11.2 | KM Plot |
KIRP | rs12120863 | chr1:89501522 | T/C | 0.00011 | 210 | 16.43 | 16.75 | 11.2 | KM Plot |
KIRP | rs12121223 | chr1:89481583 | C/T | 0.00023 | 210 | 16.97 | 14.83 | 10.23 | KM Plot |
KIRP | rs12121377 | chr1:45907138 | C/T | 4.84E-13 | 213 | 15.33 | 17 | 9 | KM Plot |
KIRP | rs12123350 | chr1:45968686 | C/G | 6.88E-7 | 210 | 15.88 | 16.77 | 7.57 | KM Plot |
KIRP | rs12127787 | chr1:89458761 | T/C | 2.69E-5 | 206 | 17 | 15.9 | 10.23 | KM Plot |
KIRP | rs12138348 | chr1:45939136 | C/T | 4.84E-13 | 213 | 15.33 | 17 | 9 | KM Plot |
KIRP | rs12140979 | chr1:89467242 | C/G | 3.02E-5 | 206 | 16.93 | 15.9 | 10.23 | KM Plot |
KIRP | rs12142922 | chr1:89489915 | A/G | 1.96E-5 | 210 | 16.93 | 15.33 | 10.72 | KM Plot |